Minimum Information about a Cardiac Electrophysiology Experiment (MICEE): standardised reporting for model reproducibility, interoperability, and data sharing

Research output: Contribution to journalJournal articleResearchpeer-review

Standard

Minimum Information about a Cardiac Electrophysiology Experiment (MICEE) : standardised reporting for model reproducibility, interoperability, and data sharing. / Quinn, T A; Granite, S; Allessie, M A; Antzelevitch, C; Bollensdorff, C; Bub, G; Burton, R A B; Cerbai, E; Chen, P S; Delmar, M; Difrancesco, D; Earm, Y E; Efimov, I R; Egger, M; Entcheva, E; Fink, M; Fischmeister, R; Franz, M R; Garny, A; Giles, W R; Hannes, T; Harding, S E; Hunter, P J; Iribe, G; Jalife, J; Johnson, C R; Kass, R S; Kodama, I; Koren, G; Lord, P; Markhasin, V S; Matsuoka, S; McCulloch, A D; Mirams, G R; Morley, G E; Nattel, S; Noble, D; Olesen, Søren-Peter; Panfilov, A V; Trayanova, N A; Ravens, U; Richard, S; Rosenbaum, D S; Rudy, Y; Sachs, F; Sachse, F B; Saint, D A; Schotten, U; Solovyova, O; Taggart, P; Tung, L; Varró, A; Volders, P G; Wang, K; Weiss, J N; Wettwer, E; White, E; Wilders, R; Winslow, R L; Kohl, P.

In: Progress in Biophysics & Molecular Biology, Vol. 107, No. 1, 2011, p. 4-10.

Research output: Contribution to journalJournal articleResearchpeer-review

Harvard

Quinn, TA, Granite, S, Allessie, MA, Antzelevitch, C, Bollensdorff, C, Bub, G, Burton, RAB, Cerbai, E, Chen, PS, Delmar, M, Difrancesco, D, Earm, YE, Efimov, IR, Egger, M, Entcheva, E, Fink, M, Fischmeister, R, Franz, MR, Garny, A, Giles, WR, Hannes, T, Harding, SE, Hunter, PJ, Iribe, G, Jalife, J, Johnson, CR, Kass, RS, Kodama, I, Koren, G, Lord, P, Markhasin, VS, Matsuoka, S, McCulloch, AD, Mirams, GR, Morley, GE, Nattel, S, Noble, D, Olesen, S-P, Panfilov, AV, Trayanova, NA, Ravens, U, Richard, S, Rosenbaum, DS, Rudy, Y, Sachs, F, Sachse, FB, Saint, DA, Schotten, U, Solovyova, O, Taggart, P, Tung, L, Varró, A, Volders, PG, Wang, K, Weiss, JN, Wettwer, E, White, E, Wilders, R, Winslow, RL & Kohl, P 2011, 'Minimum Information about a Cardiac Electrophysiology Experiment (MICEE): standardised reporting for model reproducibility, interoperability, and data sharing', Progress in Biophysics & Molecular Biology, vol. 107, no. 1, pp. 4-10. https://doi.org/10.1016/j.pbiomolbio.2011.07.001

APA

Quinn, T. A., Granite, S., Allessie, M. A., Antzelevitch, C., Bollensdorff, C., Bub, G., Burton, R. A. B., Cerbai, E., Chen, P. S., Delmar, M., Difrancesco, D., Earm, Y. E., Efimov, I. R., Egger, M., Entcheva, E., Fink, M., Fischmeister, R., Franz, M. R., Garny, A., ... Kohl, P. (2011). Minimum Information about a Cardiac Electrophysiology Experiment (MICEE): standardised reporting for model reproducibility, interoperability, and data sharing. Progress in Biophysics & Molecular Biology, 107(1), 4-10. https://doi.org/10.1016/j.pbiomolbio.2011.07.001

Vancouver

Quinn TA, Granite S, Allessie MA, Antzelevitch C, Bollensdorff C, Bub G et al. Minimum Information about a Cardiac Electrophysiology Experiment (MICEE): standardised reporting for model reproducibility, interoperability, and data sharing. Progress in Biophysics & Molecular Biology. 2011;107(1):4-10. https://doi.org/10.1016/j.pbiomolbio.2011.07.001

Author

Quinn, T A ; Granite, S ; Allessie, M A ; Antzelevitch, C ; Bollensdorff, C ; Bub, G ; Burton, R A B ; Cerbai, E ; Chen, P S ; Delmar, M ; Difrancesco, D ; Earm, Y E ; Efimov, I R ; Egger, M ; Entcheva, E ; Fink, M ; Fischmeister, R ; Franz, M R ; Garny, A ; Giles, W R ; Hannes, T ; Harding, S E ; Hunter, P J ; Iribe, G ; Jalife, J ; Johnson, C R ; Kass, R S ; Kodama, I ; Koren, G ; Lord, P ; Markhasin, V S ; Matsuoka, S ; McCulloch, A D ; Mirams, G R ; Morley, G E ; Nattel, S ; Noble, D ; Olesen, Søren-Peter ; Panfilov, A V ; Trayanova, N A ; Ravens, U ; Richard, S ; Rosenbaum, D S ; Rudy, Y ; Sachs, F ; Sachse, F B ; Saint, D A ; Schotten, U ; Solovyova, O ; Taggart, P ; Tung, L ; Varró, A ; Volders, P G ; Wang, K ; Weiss, J N ; Wettwer, E ; White, E ; Wilders, R ; Winslow, R L ; Kohl, P. / Minimum Information about a Cardiac Electrophysiology Experiment (MICEE) : standardised reporting for model reproducibility, interoperability, and data sharing. In: Progress in Biophysics & Molecular Biology. 2011 ; Vol. 107, No. 1. pp. 4-10.

Bibtex

@article{25b47b9d8d044eefb2dc64743ac14b11,
title = "Minimum Information about a Cardiac Electrophysiology Experiment (MICEE): standardised reporting for model reproducibility, interoperability, and data sharing",
abstract = "Cardiac experimental electrophysiology is in need of a well-defined Minimum Information Standard for recording, annotating, and reporting experimental data. As a step towards establishing this, we present a draft standard, called Minimum Information about a Cardiac Electrophysiology Experiment (MICEE). The ultimate goal is to develop a useful tool for cardiac electrophysiologists which facilitates and improves dissemination of the minimum information necessary for reproduction of cardiac electrophysiology research, allowing for easier comparison and utilisation of findings by others. It is hoped that this will enhance the integration of individual results into experimental, computational, and conceptual models. In its present form, this draft is intended for assessment and development by the research community. We invite the reader to join this effort, and, if deemed productive, implement the Minimum Information about a Cardiac Electrophysiology Experiment standard in their own work.",
keywords = "Animals, Electrophysiological Processes, Heart, Humans, Information Dissemination, Models, Biological, Reference Standards, Reproducibility of Results, Research Design",
author = "Quinn, {T A} and S Granite and Allessie, {M A} and C Antzelevitch and C Bollensdorff and G Bub and Burton, {R A B} and E Cerbai and Chen, {P S} and M Delmar and D Difrancesco and Earm, {Y E} and Efimov, {I R} and M Egger and E Entcheva and M Fink and R Fischmeister and Franz, {M R} and A Garny and Giles, {W R} and T Hannes and Harding, {S E} and Hunter, {P J} and G Iribe and J Jalife and Johnson, {C R} and Kass, {R S} and I Kodama and G Koren and P Lord and Markhasin, {V S} and S Matsuoka and McCulloch, {A D} and Mirams, {G R} and Morley, {G E} and S Nattel and D Noble and S{\o}ren-Peter Olesen and Panfilov, {A V} and Trayanova, {N A} and U Ravens and S Richard and Rosenbaum, {D S} and Y Rudy and F Sachs and Sachse, {F B} and Saint, {D A} and U Schotten and O Solovyova and P Taggart and L Tung and A Varr{\'o} and Volders, {P G} and K Wang and Weiss, {J N} and E Wettwer and E White and R Wilders and Winslow, {R L} and P Kohl",
note = "Copyright {\textcopyright} 2011 Elsevier Ltd. All rights reserved.",
year = "2011",
doi = "10.1016/j.pbiomolbio.2011.07.001",
language = "English",
volume = "107",
pages = "4--10",
journal = "Progress in Biophysics and Molecular Biology",
issn = "0079-6107",
publisher = "Pergamon Press",
number = "1",

}

RIS

TY - JOUR

T1 - Minimum Information about a Cardiac Electrophysiology Experiment (MICEE)

T2 - standardised reporting for model reproducibility, interoperability, and data sharing

AU - Quinn, T A

AU - Granite, S

AU - Allessie, M A

AU - Antzelevitch, C

AU - Bollensdorff, C

AU - Bub, G

AU - Burton, R A B

AU - Cerbai, E

AU - Chen, P S

AU - Delmar, M

AU - Difrancesco, D

AU - Earm, Y E

AU - Efimov, I R

AU - Egger, M

AU - Entcheva, E

AU - Fink, M

AU - Fischmeister, R

AU - Franz, M R

AU - Garny, A

AU - Giles, W R

AU - Hannes, T

AU - Harding, S E

AU - Hunter, P J

AU - Iribe, G

AU - Jalife, J

AU - Johnson, C R

AU - Kass, R S

AU - Kodama, I

AU - Koren, G

AU - Lord, P

AU - Markhasin, V S

AU - Matsuoka, S

AU - McCulloch, A D

AU - Mirams, G R

AU - Morley, G E

AU - Nattel, S

AU - Noble, D

AU - Olesen, Søren-Peter

AU - Panfilov, A V

AU - Trayanova, N A

AU - Ravens, U

AU - Richard, S

AU - Rosenbaum, D S

AU - Rudy, Y

AU - Sachs, F

AU - Sachse, F B

AU - Saint, D A

AU - Schotten, U

AU - Solovyova, O

AU - Taggart, P

AU - Tung, L

AU - Varró, A

AU - Volders, P G

AU - Wang, K

AU - Weiss, J N

AU - Wettwer, E

AU - White, E

AU - Wilders, R

AU - Winslow, R L

AU - Kohl, P

N1 - Copyright © 2011 Elsevier Ltd. All rights reserved.

PY - 2011

Y1 - 2011

N2 - Cardiac experimental electrophysiology is in need of a well-defined Minimum Information Standard for recording, annotating, and reporting experimental data. As a step towards establishing this, we present a draft standard, called Minimum Information about a Cardiac Electrophysiology Experiment (MICEE). The ultimate goal is to develop a useful tool for cardiac electrophysiologists which facilitates and improves dissemination of the minimum information necessary for reproduction of cardiac electrophysiology research, allowing for easier comparison and utilisation of findings by others. It is hoped that this will enhance the integration of individual results into experimental, computational, and conceptual models. In its present form, this draft is intended for assessment and development by the research community. We invite the reader to join this effort, and, if deemed productive, implement the Minimum Information about a Cardiac Electrophysiology Experiment standard in their own work.

AB - Cardiac experimental electrophysiology is in need of a well-defined Minimum Information Standard for recording, annotating, and reporting experimental data. As a step towards establishing this, we present a draft standard, called Minimum Information about a Cardiac Electrophysiology Experiment (MICEE). The ultimate goal is to develop a useful tool for cardiac electrophysiologists which facilitates and improves dissemination of the minimum information necessary for reproduction of cardiac electrophysiology research, allowing for easier comparison and utilisation of findings by others. It is hoped that this will enhance the integration of individual results into experimental, computational, and conceptual models. In its present form, this draft is intended for assessment and development by the research community. We invite the reader to join this effort, and, if deemed productive, implement the Minimum Information about a Cardiac Electrophysiology Experiment standard in their own work.

KW - Animals

KW - Electrophysiological Processes

KW - Heart

KW - Humans

KW - Information Dissemination

KW - Models, Biological

KW - Reference Standards

KW - Reproducibility of Results

KW - Research Design

U2 - 10.1016/j.pbiomolbio.2011.07.001

DO - 10.1016/j.pbiomolbio.2011.07.001

M3 - Journal article

C2 - 21745496

VL - 107

SP - 4

EP - 10

JO - Progress in Biophysics and Molecular Biology

JF - Progress in Biophysics and Molecular Biology

SN - 0079-6107

IS - 1

ER -

ID: 38505753