Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus

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Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus. / Lu, Aiping; Watkins, Maren; Li, Qing; Robinson, Samuel D.; Concepcion, Gisela P.; Yandell, Mark; Weng, Zhiping; Olivera, Baldomero M.; Safavi-Hemami, Helena; Fedosov, Alexander E.

I: Genome Biology and Evolution, Bind 12, Nr. 5, 2020, s. 684-700.

Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

Harvard

Lu, A, Watkins, M, Li, Q, Robinson, SD, Concepcion, GP, Yandell, M, Weng, Z, Olivera, BM, Safavi-Hemami, H & Fedosov, AE 2020, 'Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus', Genome Biology and Evolution, bind 12, nr. 5, s. 684-700. https://doi.org/10.1093/gbe/evaa083

APA

Lu, A., Watkins, M., Li, Q., Robinson, S. D., Concepcion, G. P., Yandell, M., Weng, Z., Olivera, B. M., Safavi-Hemami, H., & Fedosov, A. E. (2020). Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus. Genome Biology and Evolution, 12(5), 684-700. https://doi.org/10.1093/gbe/evaa083

Vancouver

Lu A, Watkins M, Li Q, Robinson SD, Concepcion GP, Yandell M o.a. Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus. Genome Biology and Evolution. 2020;12(5):684-700. https://doi.org/10.1093/gbe/evaa083

Author

Lu, Aiping ; Watkins, Maren ; Li, Qing ; Robinson, Samuel D. ; Concepcion, Gisela P. ; Yandell, Mark ; Weng, Zhiping ; Olivera, Baldomero M. ; Safavi-Hemami, Helena ; Fedosov, Alexander E. / Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus. I: Genome Biology and Evolution. 2020 ; Bind 12, Nr. 5. s. 684-700.

Bibtex

@article{b76b6e7a7093473f8a2978efd935f546,
title = "Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus",
abstract = "Predatory gastropods of the superfamily Conoidea number over 12,000 living species. The evolutionary success of this lineage can be explained by the ability of conoideans to produce complex venoms for hunting, defense, and competitive interactions. Whereas venoms of cone snails (family Conidae) have become increasingly well studied, the venoms of most other conoidean lineages remain largely uncharacterized. In the present study, we present the venom gland transcriptomes of two species of the genus Clavus that belong to the family Drilliidae. Venom gland transcriptomes of two specimens of Clavus canalicularis and two specimens of Clavus davidgilmouri were analyzed, leading to the identification of a total of 1,176 putative venom peptide toxins (drillipeptides). Based on the combined evidence of secretion signal sequence identity, entire precursor similarity search (BLAST), and the orthology inference, putative Clavus toxins were assigned to 158 different gene families. The majority of identified transcripts comprise signal, pro-, mature peptide, and post-regions, with a typically short (<50 amino acids) and cysteine-rich mature peptide region. Thus, drillipeptides are structurally similar to conotoxins. However, convincing homology with known groups of Conus toxins was only detected for very few toxin families. Among these are Clavus counterparts of Conus venom insulins (drillinsulins), porins (drilliporins), and highly diversified lectins (drillilectins). The short size of most drillipeptides and structural similarity to conotoxins were unexpected, given that most related conoidean gastropod families (Terebridae and Turridae) possess longer mature peptide regions. Our findings indicate that, similar to conotoxins, drillipeptides may represent a valuable resource for future pharmacological exploration.",
keywords = "Clavus, Conoidea, drillipeptides, transcriptome, venom, venom gland",
author = "Aiping Lu and Maren Watkins and Qing Li and Robinson, {Samuel D.} and Concepcion, {Gisela P.} and Mark Yandell and Zhiping Weng and Olivera, {Baldomero M.} and Helena Safavi-Hemami and Fedosov, {Alexander E.}",
year = "2020",
doi = "10.1093/gbe/evaa083",
language = "English",
volume = "12",
pages = "684--700",
journal = "Genome Biology and Evolution",
issn = "1759-6653",
publisher = "Oxford University Press",
number = "5",

}

RIS

TY - JOUR

T1 - Transcriptomic Profiling Reveals Extraordinary Diversity of Venom Peptides in Unexplored Predatory Gastropods of the Genus Clavus

AU - Lu, Aiping

AU - Watkins, Maren

AU - Li, Qing

AU - Robinson, Samuel D.

AU - Concepcion, Gisela P.

AU - Yandell, Mark

AU - Weng, Zhiping

AU - Olivera, Baldomero M.

AU - Safavi-Hemami, Helena

AU - Fedosov, Alexander E.

PY - 2020

Y1 - 2020

N2 - Predatory gastropods of the superfamily Conoidea number over 12,000 living species. The evolutionary success of this lineage can be explained by the ability of conoideans to produce complex venoms for hunting, defense, and competitive interactions. Whereas venoms of cone snails (family Conidae) have become increasingly well studied, the venoms of most other conoidean lineages remain largely uncharacterized. In the present study, we present the venom gland transcriptomes of two species of the genus Clavus that belong to the family Drilliidae. Venom gland transcriptomes of two specimens of Clavus canalicularis and two specimens of Clavus davidgilmouri were analyzed, leading to the identification of a total of 1,176 putative venom peptide toxins (drillipeptides). Based on the combined evidence of secretion signal sequence identity, entire precursor similarity search (BLAST), and the orthology inference, putative Clavus toxins were assigned to 158 different gene families. The majority of identified transcripts comprise signal, pro-, mature peptide, and post-regions, with a typically short (<50 amino acids) and cysteine-rich mature peptide region. Thus, drillipeptides are structurally similar to conotoxins. However, convincing homology with known groups of Conus toxins was only detected for very few toxin families. Among these are Clavus counterparts of Conus venom insulins (drillinsulins), porins (drilliporins), and highly diversified lectins (drillilectins). The short size of most drillipeptides and structural similarity to conotoxins were unexpected, given that most related conoidean gastropod families (Terebridae and Turridae) possess longer mature peptide regions. Our findings indicate that, similar to conotoxins, drillipeptides may represent a valuable resource for future pharmacological exploration.

AB - Predatory gastropods of the superfamily Conoidea number over 12,000 living species. The evolutionary success of this lineage can be explained by the ability of conoideans to produce complex venoms for hunting, defense, and competitive interactions. Whereas venoms of cone snails (family Conidae) have become increasingly well studied, the venoms of most other conoidean lineages remain largely uncharacterized. In the present study, we present the venom gland transcriptomes of two species of the genus Clavus that belong to the family Drilliidae. Venom gland transcriptomes of two specimens of Clavus canalicularis and two specimens of Clavus davidgilmouri were analyzed, leading to the identification of a total of 1,176 putative venom peptide toxins (drillipeptides). Based on the combined evidence of secretion signal sequence identity, entire precursor similarity search (BLAST), and the orthology inference, putative Clavus toxins were assigned to 158 different gene families. The majority of identified transcripts comprise signal, pro-, mature peptide, and post-regions, with a typically short (<50 amino acids) and cysteine-rich mature peptide region. Thus, drillipeptides are structurally similar to conotoxins. However, convincing homology with known groups of Conus toxins was only detected for very few toxin families. Among these are Clavus counterparts of Conus venom insulins (drillinsulins), porins (drilliporins), and highly diversified lectins (drillilectins). The short size of most drillipeptides and structural similarity to conotoxins were unexpected, given that most related conoidean gastropod families (Terebridae and Turridae) possess longer mature peptide regions. Our findings indicate that, similar to conotoxins, drillipeptides may represent a valuable resource for future pharmacological exploration.

KW - Clavus

KW - Conoidea

KW - drillipeptides

KW - transcriptome

KW - venom

KW - venom gland

U2 - 10.1093/gbe/evaa083

DO - 10.1093/gbe/evaa083

M3 - Journal article

C2 - 32333764

AN - SCOPUS:85085905583

VL - 12

SP - 684

EP - 700

JO - Genome Biology and Evolution

JF - Genome Biology and Evolution

SN - 1759-6653

IS - 5

ER -

ID: 243377908